STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2293KEGG: xac:XAC3966 hypothetical protein. (320 aa)    
Predicted Functional Partners:
Pnap_2294
Hypothetical protein.
       0.773
Pnap_1073
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE3 domain protein; KEGG: pfl:PFL_3251 sensor histidine kinase/response regulator.
  
  
 0.674
Pnap_1830
Catalase; PFAM: ThiJ/PfpI domain protein; Catalase domain protein; KEGG: nmu:Nmul_A1515 catalase.
 
  
 0.600
Pnap_1993
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
 
  
 0.598
Pnap_2292
Hypothetical protein.
       0.545
Pnap_2291
TIGRFAM: putative transcriptional regulator, Rrf2 family; iron-sulfur cluster assembly transcription factor IscR; PFAM: protein of unknown function UPF0074; KEGG: pol:Bpro_2177 transcriptional regulator, BadM/Rrf2 family.
       0.541
Pnap_0920
PFAM: protein of unknown function DUF1328; KEGG: pol:Bpro_0879 protein of unknown function DUF1328.
 
    0.525
Pnap_2295
KEGG: tbd:Tbd_0731 hypothetical protein.
       0.483
Pnap_1086
PFAM: 17 kDa surface antigen; KEGG: pol:Bpro_1601 17 kDa surface antigen.
   
  
 0.482
Pnap_2557
Bacterioferritin; Iron-storage protein.
   
  
 0.482
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.