STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2296PFAM: DSBA oxidoreductase; KEGG: pol:Bpro_3008 DsbA oxidoreductase. (221 aa)    
Predicted Functional Partners:
Pnap_1087
PFAM: arsenate reductase and related; KEGG: pol:Bpro_1602 hypothetical protein; Belongs to the ArsC family.
   
 
 0.737
Pnap_2351
TIGRFAM: nitrogenase-associated protein; PFAM: arsenate reductase and related; KEGG: bxe:Bxe_B1460 nitrogenase-associated protein; Belongs to the ArsC family.
   
 
 0.737
Pnap_2586
TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: pol:Bpro_2219 arsenate reductase.
   
 
 0.737
Pnap_2297
PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: pol:Bpro_1210 beta-lactamase-like.
       0.533
Pnap_1539
PFAM: NADPH-dependent FMN reductase; KEGG: pol:Bpro_2371 NADPH-dependent FMN reductase.
 
    0.485
Pnap_1447
PFAM: luciferase family protein; KEGG: dar:Daro_1097 luciferase-like.
  
  
 0.455
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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