STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2301PFAM: heat shock protein Hsp20; KEGG: pol:Bpro_1199 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. (142 aa)    
Predicted Functional Partners:
Pnap_2304
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: rfr:Rfer_1940 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.785
Pnap_2303
PFAM: protein of unknown function DUF214; KEGG: rfr:Rfer_1941 protein of unknown function DUF214.
       0.755
Pnap_2302
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_1942 ABC transporter related.
       0.754
clpB
ATPase AAA-2 domain protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
 
 
 0.684
Pnap_1934
KEGG: pol:Bpro_2940 ATPase AAA-2; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; Belongs to the ClpA/ClpB family.
  
 
 0.629
Pnap_2300
PFAM: transport-associated; SMART: Transport-associated and nodulation region, bacteria; KEGG: pol:Bpro_1200 transport-associated.
       0.619
Pnap_2186
Erythromycin esterase; PFAM: phosphoribosyltransferase; Erythromycin esterase; KEGG: pol:Bpro_2391 erythromycin esterase.
 
  
 0.587
Pnap_2299
PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: pol:Bpro_1201 putative alcohol dehydrogenase-like oxidoreductase protein.
 
 
 0.524
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
  
 
 0.490
nnrE
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]
 
  
 0.473
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.