STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2347KEGG: bxe:Bxe_B1463 hypothetical protein. (202 aa)    
Predicted Functional Partners:
Pnap_2352
TIGRFAM: putative regulatory protein, FmdB family; KEGG: bxe:Bxe_B1459 hypothetical protein.
 
     0.922
Pnap_2350
PFAM: Ankyrin; SMART: Rhodanese domain protein; KEGG: bxe:Bxe_B1461 putative ankyrin repeat protein.
 
     0.899
Pnap_2351
TIGRFAM: nitrogenase-associated protein; PFAM: arsenate reductase and related; KEGG: bxe:Bxe_B1460 nitrogenase-associated protein; Belongs to the ArsC family.
 
     0.880
Pnap_2349
KEGG: mca:MCA0222 hypothetical protein.
 
     0.845
Pnap_2346
PFAM: globin; KEGG: bxe:Bxe_B1464 putative globin.
 
     0.786
Pnap_1586
KEGG: bxe:Bxe_B1457 hypothetical protein.
 
     0.783
Pnap_1577
KEGG: bxe:Bxe_B1448 hypothetical protein.
  
     0.775
Pnap_1580
PFAM: NifZ family protein; KEGG: bxe:Bxe_B1451 hypothetical protein.
  
     0.775
Pnap_2318
KEGG: rpc:RPC_4469 tetratricopeptide TPR_2.
  
     0.772
Pnap_1578
PFAM: leucine rich repeat variant; KEGG: bxe:Bxe_B1449 hypothetical protein.
  
     0.771
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.