STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2349KEGG: mca:MCA0222 hypothetical protein. (564 aa)    
Predicted Functional Partners:
Pnap_2351
TIGRFAM: nitrogenase-associated protein; PFAM: arsenate reductase and related; KEGG: bxe:Bxe_B1460 nitrogenase-associated protein; Belongs to the ArsC family.
     0.968
Pnap_2350
PFAM: Ankyrin; SMART: Rhodanese domain protein; KEGG: bxe:Bxe_B1461 putative ankyrin repeat protein.
 
 
   0.916
Pnap_2348
PFAM: Ankyrin; KEGG: bxe:Bxe_B1462 putative ankyrin repeat protein.
 
 
   0.870
Pnap_2347
KEGG: bxe:Bxe_B1463 hypothetical protein.
 
     0.845
Pnap_2352
TIGRFAM: putative regulatory protein, FmdB family; KEGG: bxe:Bxe_B1459 hypothetical protein.
 
     0.802
Pnap_2338
PFAM: AAA ATPase, central domain protein; KEGG: mca:MCA0262 ATPase, AAA family.
 
     0.769
Pnap_2353
PFAM: OsmC family protein; KEGG: lpp:lpp1954 hypothetical protein.
       0.721
Pnap_2354
Hypothetical protein.
       0.721
Pnap_2318
KEGG: rpc:RPC_4469 tetratricopeptide TPR_2.
  
     0.699
Pnap_2404
PFAM: Glutathione S-transferase, N-terminal domain; KEGG: mca:MCA1303 glutathione S-transferase.
  
     0.685
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.