STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2350PFAM: Ankyrin; SMART: Rhodanese domain protein; KEGG: bxe:Bxe_B1461 putative ankyrin repeat protein. (255 aa)    
Predicted Functional Partners:
Pnap_2398
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pol:Bpro_4146 tetratricopeptide TPR_2.
 
 0.943
Pnap_2351
TIGRFAM: nitrogenase-associated protein; PFAM: arsenate reductase and related; KEGG: bxe:Bxe_B1460 nitrogenase-associated protein; Belongs to the ArsC family.
 
     0.930
Pnap_2349
KEGG: mca:MCA0222 hypothetical protein.
 
 
   0.916
Pnap_2347
KEGG: bxe:Bxe_B1463 hypothetical protein.
 
     0.899
apaH
Bis(5'nucleosyl)-tetraphosphatase, ApaH; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
   
 0.892
Pnap_0825
NAD-dependent formate dehydrogenase flavoprotein subunit; PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: rfr:Rfer_3270 NADH dehydrogenase (quinone).
  
 0.859
Pnap_2352
TIGRFAM: putative regulatory protein, FmdB family; KEGG: bxe:Bxe_B1459 hypothetical protein.
 
     0.836
Pnap_1379
KEGG: pol:Bpro_3295 acyl carrier protein.
   
 0.832
Pnap_2673
PFAM: phosphopantetheine-binding; KEGG: sil:SPO1931 acyl carrier protein, putative.
   
 0.832
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 0.832
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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