STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2374PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: pol:Bpro_2174 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B. (284 aa)    
Predicted Functional Partners:
Pnap_2928
PFAM: Pirin domain protein domain protein; Pirin domain protein; KEGG: pol:Bpro_2897 pirin-like; Belongs to the pirin family.
 
  
 0.713
Pnap_3993
PFAM: Pirin domain protein domain protein; Pirin domain protein; KEGG: pol:Bpro_4775 pirin-like; Belongs to the pirin family.
 
  
 0.696
Pnap_2931
PFAM: Pirin domain protein domain protein; Cupin 2, conserved barrel domain protein; KEGG: pol:Bpro_2901 pirin-like; Belongs to the pirin family.
 
  
 0.656
Pnap_1307
PFAM: phospholipase/Carboxylesterase; KEGG: pol:Bpro_3402 carboxylesterase.
      0.619
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.