STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2398PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pol:Bpro_4146 tetratricopeptide TPR_2. (287 aa)    
Predicted Functional Partners:
Pnap_2350
PFAM: Ankyrin; SMART: Rhodanese domain protein; KEGG: bxe:Bxe_B1461 putative ankyrin repeat protein.
 
 0.943
Pnap_3006
PFAM: Ankyrin; KEGG: reu:Reut_B5420 ankyrin.
 
 0.937
Pnap_1952
PFAM: Ankyrin; KEGG: pol:Bpro_2515 ankyrin.
 
 0.936
Pnap_2348
PFAM: Ankyrin; KEGG: bxe:Bxe_B1462 putative ankyrin repeat protein.
  
 0.925
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
  
 0.887
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.869
Pnap_3093
Glycosyltransferase 36; PFAM: putative carbohydrate binding; glycosyltransferase 36; KEGG: pol:Bpro_3667 cyclic beta 1-2 glucan synthetase.
  
 
 0.869
Pnap_3187
PFAM: glycosyl transferase, family 2; KEGG: ava:Ava_0268 glycosyl transferase, family 2.
  
 
 0.866
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
 0.863
Pnap_1319
PFAM: OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein; KEGG: rfr:Rfer_1882 OmpA/MotB; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
   
 
 0.846
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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