STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2401Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (190 aa)    
Predicted Functional Partners:
Pnap_2402
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutaredoxin; KEGG: pol:Bpro_3045 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
  
 0.988
Pnap_1830
Catalase; PFAM: ThiJ/PfpI domain protein; Catalase domain protein; KEGG: nmu:Nmul_A1515 catalase.
  
 
 0.908
Pnap_1993
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.908
Pnap_2433
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pol:Bpro_2333 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.877
Pnap_3213
KEGG: pol:Bpro_3801 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.877
Pnap_1796
TIGRFAM: Glutaredoxin-family domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; glutaredoxin; Redoxin domain protein; KEGG: ava:Ava_4981 glutaredoxin-like region.
  
 0.874
Pnap_0213
Redoxin domain protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.798
fur
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: pol:Bpro_4610 ferric uptake regulator, FUR family; Belongs to the Fur family.
  
  
 0.748
Pnap_0325
PFAM: Ferritin, Dps family protein; KEGG: ana:all4145 probable DNA-binding stress protein; Belongs to the Dps family.
  
  
 0.677
Pnap_0217
PFAM: Redoxin domain protein; KEGG: pol:Bpro_0270 putative transmembrane protein.
  
 0.645
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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