STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2513PFAM: Thioredoxin domain; KEGG: rfr:Rfer_1598 hypothetical protein. (126 aa)    
Predicted Functional Partners:
Pnap_2512
PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: rfr:Rfer_1597 cytochrome c biogenesis protein, transmembrane protein.
 
 
 0.903
Pnap_2401
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 0.645
Pnap_0825
NAD-dependent formate dehydrogenase flavoprotein subunit; PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: rfr:Rfer_3270 NADH dehydrogenase (quinone).
  
 
 0.576
Pnap_2514
Hypothetical protein; KEGG: pol:Bpro_5539 transposase, IS204/IS1001/IS1096/IS1165.
       0.536
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.535
Pnap_1796
TIGRFAM: Glutaredoxin-family domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; glutaredoxin; Redoxin domain protein; KEGG: ava:Ava_4981 glutaredoxin-like region.
  
 0.504
Pnap_3385
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 
 0.492
Pnap_0376
PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: pol:Bpro_4257 thiol-disulfide interchange protein DsbD-like.
  
 
 0.491
Pnap_0565
KEGG: ccr:CC0217 ThiO:disulfide interchange protein, putative.
  
 
 0.491
Pnap_1496
PFAM: Rhodanese domain protein; KEGG: pol:Bpro_1742 3-mercaptopyruvate sulfurtransferase.
    
 0.483
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.