STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2557Bacterioferritin; Iron-storage protein. (158 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.927
Pnap_1073
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE3 domain protein; KEGG: pfl:PFL_3251 sensor histidine kinase/response regulator.
   
  
 0.868
Pnap_2567
KEGG: pol:Bpro_3050 hypothetical protein.
  
 
 0.866
Pnap_2556
SMART: HNH nuclease; KEGG: pol:Bpro_2722 HNH nuclease.
       0.534
Pnap_1830
Catalase; PFAM: ThiJ/PfpI domain protein; Catalase domain protein; KEGG: nmu:Nmul_A1515 catalase.
  
  
 0.513
Pnap_1993
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.513
Pnap_1352
KEGG: pol:Bpro_3349 hypothetical protein.
   
  
 0.482
Pnap_2293
KEGG: xac:XAC3966 hypothetical protein.
   
  
 0.482
Pnap_0325
PFAM: Ferritin, Dps family protein; KEGG: ana:all4145 probable DNA-binding stress protein; Belongs to the Dps family.
   
  
 0.470
Pnap_2558
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: pol:Bpro_3047 TonB-dependent siderophore receptor.
     
 0.442
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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