STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2625Ethanolamine:proton symporter, EAT family; TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: rfr:Rfer_0585 amino acid permease-associated protein; TC 2.A.3.5.1. (463 aa)    
Predicted Functional Partners:
Pnap_0232
PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: atc:AGR_pTi_251 sucrose phosphorylase SplA.
  
 0.955
Pnap_2626
Ethanolamine ammonia-lyase heavy chain; PFAM: Ethanolamine ammonia lyase large subunit; KEGG: rfr:Rfer_0586 ethanolamine ammonia lyase large subunit.
 
  
 0.928
Pnap_2627
PFAM: Ethanolamine ammonia-lyase light chain; KEGG: rfr:Rfer_0587 ethanolamine ammonia-lyase; Belongs to the EutC family.
 
  
 0.906
Pnap_2624
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: rfr:Rfer_0584 transcriptional regulator, AraC family.
 
   
 0.633
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.526
Pnap_2793
TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: pol:Bpro_1792 chorismate mutase.
   
 
 0.464
Pnap_1784
TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: pol:Bpro_2669 dihydrolipoamide dehydrogenase.
   
 
 0.444
Pnap_1786
PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rfr:Rfer_2214 dihydrolipoamide dehydrogenase.
   
 
 0.444
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
  
  
 0.442
trpF
PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: pol:Bpro_3615 phosphoribosylanthranilate isomerase; Belongs to the TrpF family.
    
 
 0.429
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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