STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2627PFAM: Ethanolamine ammonia-lyase light chain; KEGG: rfr:Rfer_0587 ethanolamine ammonia-lyase; Belongs to the EutC family. (286 aa)    
Predicted Functional Partners:
Pnap_2626
Ethanolamine ammonia-lyase heavy chain; PFAM: Ethanolamine ammonia lyase large subunit; KEGG: rfr:Rfer_0586 ethanolamine ammonia lyase large subunit.
 0.999
Pnap_2625
Ethanolamine:proton symporter, EAT family; TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: rfr:Rfer_0585 amino acid permease-associated protein; TC 2.A.3.5.1.
 
  
 0.906
Pnap_2092
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bpm:BURPS1710b_3194 glycerophosphoryl diester phosphodiesterase family protein.
     
  0.900
Pnap_2624
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: rfr:Rfer_0584 transcriptional regulator, AraC family.
 
   
 0.760
Pnap_3016
KEGG: gka:GK3199 hypothetical protein.
      0.644
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.