STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2648KEGG: rso:RSc1868 hypothetical protein. (95 aa)    
Predicted Functional Partners:
Pnap_2652
KEGG: rfr:Rfer_1359 conserved hypothetical membrane spanning protein.
       0.786
Pnap_2649
Hypothetical protein.
       0.773
Pnap_2650
Hypothetical protein.
       0.773
Pnap_2651
Hypothetical protein.
       0.773
Pnap_2653
KEGG: rfr:Rfer_1358 hypothetical protein.
       0.773
Pnap_2647
Phage transcriptional regulator, AlpA; PFAM: Prophage CP4-57 regulatory; KEGG: cvi:CV3853 hypothetical protein.
  
    0.593
Pnap_2654
Hypothetical protein.
       0.496
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.