STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2674PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: pmt:PMT0413 NAD binding site. (443 aa)    
Predicted Functional Partners:
Pnap_2675
KEGG: cch:Cag_0252 hypothetical protein.
 
     0.871
Pnap_2676
PFAM: chalcone and stilbene synthases domain protein; Chalcone and stilbene synthases domain protein; FAE1/Type III polyketide synthase-like protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: sru:SRU_1395 chalcone synthase, putative.
 
  
 0.838
Pnap_2672
3-oxoacyl-[acyl-carrier-protein] synthase II; PFAM: beta-ketoacyl synthase; KEGG: dar:Daro_4170 beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.784
Pnap_2673
PFAM: phosphopantetheine-binding; KEGG: sil:SPO1931 acyl carrier protein, putative.
       0.778
Pnap_2679
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
  
 
 0.493
Pnap_2677
PFAM: thioesterase superfamily protein; KEGG: pol:Bpro_1898 thioesterase superfamily.
       0.451
Pnap_2964
Farnesyl-diphosphate farnesyltransferase; PFAM: Squalene/phytoene synthase; KEGG: pol:Bpro_2017 squalene/phytoene synthase.
  
  
 0.432
Pnap_1366
PFAM: phospholipid/glycerol acyltransferase; KEGG: pol:Bpro_3310 phospholipid/glycerol acyltransferase.
 
     0.419
Pnap_1367
PFAM: glycosyl transferase, family 2; KEGG: pol:Bpro_3309 glycosyl transferase, family 2.
 
   
 0.402
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.