STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2689Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: corR; DNA-binding response regulator CorR. (224 aa)    
Predicted Functional Partners:
Pnap_2688
Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rme:Rmet_4855 periplasmic sensor hybrid histidine kinase.
 
 
 
 0.859
Pnap_0789
Histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: pol:Bpro_4297 PAS/PAC sensor signal transduction histidine kinase.
 
 
 0.842
Pnap_0921
Multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; CHASE3 domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: pol:Bpro_0880 multi-sensor signal transduction histidine kinase.
 
 
 0.840
Pnap_3598
Signal transduction histidine kinase, glucose-6-phosphate specific; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: mfa:Mfla_0814 signal transduction histidine kinase, glucose-6-phosphate specific.
 
 
 0.840
Pnap_2641
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: bja:blr5280 similar to two-component sensor histidine kinase.
 
 
 0.836
Pnap_4085
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: bbr:BB2739 probable two-component sensor histidine kinase.
 
 
 0.821
Pnap_1851
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: pol:Bpro_2543 two component transcriptional regulator, LuxR family.
  
     0.775
Pnap_2690
Secreted hydrolase-like protein; KEGG: mbo:Mb1015 possible conserved exported protein.
       0.773
Pnap_0791
PFAM: response regulator receiver; KEGG: pol:Bpro_1169 response regulator receiver domain protein (CheY-like).
  
     0.768
Pnap_3765
Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: pol:Bpro_4599 signal transduction histidine kinase, nitrate/nitrite-specific, NarQ.
 
 
 0.768
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.