STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2691Sulfite dehydrogenase (cytochrome) subunit SorB; KEGG: cps:CPS_4930 cytochrome c family protein. (155 aa)    
Predicted Functional Partners:
Pnap_2692
Sulfite dehydrogenase (cytochrome) subunit SorA apoprotein; PFAM: oxidoreductase, molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: reu:Reut_A3083 twin-arginine translocation pathway signal.
 
 
 
 0.964
Pnap_2690
Secreted hydrolase-like protein; KEGG: mbo:Mb1015 possible conserved exported protein.
 
     0.617
Pnap_0721
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: bja:blr6189 hypothetical protein.
 
  
 0.563
Pnap_2688
Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rme:Rmet_4855 periplasmic sensor hybrid histidine kinase.
       0.559
Pnap_2689
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: corR; DNA-binding response regulator CorR.
       0.559
Pnap_2208
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: pol:Bpro_2250 twin-arginine translocation pathway signal; TC 3.A.1.4.-.
  
     0.554
Pnap_1675
KEGG: pol:Bpro_2272 putative signal peptide protein.
  
     0.553
Pnap_2694
PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: bja:blr6160 hypothetical protein.
 
     0.525
Pnap_2695
PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: bja:blr6161 putative dehydrogenase.
 
     0.497
Pnap_2785
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: pol:Bpro_1802 hypothetical protein.
 
  
 0.484
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.