STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2765PFAM: Silent information regulator protein Sir2; KEGG: dar:Daro_0006 silent information regulator protein Sir2. (285 aa)    
Predicted Functional Partners:
Pnap_1441
PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; KEGG: pol:Bpro_3239 Glu/Leu/Phe/Val dehydrogenase, C terminal; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.744
Pnap_3964
PFAM: nuclear protein SET; KEGG: pol:Bpro_4715 nuclear protein SET.
    
 0.738
Pnap_2975
KEGG: nmu:Nmul_A2145 hypothetical protein.
    
  0.655
Pnap_4029
PFAM: cytochrome P450; KEGG: pol:Bpro_1581 cytochrome P450.
    
  0.655
Pnap_3717
TIGRFAM: cytidyltransferase-related domain; PFAM: NUDIX hydrolase; cytidylyltransferase; KEGG: syf:Synpcc7942_0205 cytidyltransferase-related.
  
  
 0.626
Pnap_1703
Signal transduction histidine kinase with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 0.612
Pnap_2766
KEGG: rso:RSc0133 hypothetical protein.
       0.601
Pnap_1181
KEGG: pol:Bpro_3186 hypothetical protein.
   
    0.600
Pnap_2217
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: pol:Bpro_2825 transcriptional regulator, AraC family.
  
  
 0.561
Pnap_2767
PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: pol:Bpro_1506 FAD linked oxidase-like.
       0.531
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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