STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2824PFAM: beta-lactamase domain protein; KEGG: bxe:Bxe_B0675 putative metallo-beta-lactamase family protein. (286 aa)    
Predicted Functional Partners:
Pnap_3516
Thiosulfate sulfurtransferase; SMART: Rhodanese domain protein; KEGG: pol:Bpro_4049 rhodanese-like.
 
 
 0.839
Pnap_2834
PFAM: Rhodanese domain protein; KEGG: noc:Noc_2007 metallo-beta-lactamase family protein.
 
 
 0.759
Pnap_2761
PFAM: protein of unknown function DUF1446; KEGG: bbr:BB3206 hypothetical protein.
 
    
 0.571
Pnap_2821
PFAM: beta-lactamase domain protein; KEGG: mfa:Mfla_1733 beta-lactamase-like protein.
 
     0.564
Pnap_2823
KEGG: rpc:RPC_1203 dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like.
       0.509
Pnap_0538
Thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; KEGG: bxe:Bxe_B1556 hypothetical protein.
 
 
 0.498
Pnap_2825
PFAM: cytochrome c, class I; KEGG: bmb:BruAb2_0829 cytochrome c family protein.
    
 0.490
Pnap_1666
Sulfide dehydrogenase (flavocytochrome), flavoprotein subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: reu:Reut_A3261 twin-arginine translocation pathway signal.
   
 0.448
Pnap_3984
PFAM: Glutathione S-transferase, N-terminal domain; KEGG: rfr:Rfer_4017 glutathione S-transferase-like; Belongs to the GST superfamily.
  
 
 0.403
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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