STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2914KEGG: xcv:XCV2814 type IV pilin PilE. (144 aa)    
Predicted Functional Partners:
Pnap_2913
KEGG: pae:PA4554 type 4 fimbrial biogenesis protein PilY1.
 
  
 0.977
Pnap_2910
TIGRFAM: type IV pilus modification protein PilV; KEGG: noc:Noc_2271 type IV fimbrial biogenesis protein PilV.
 
  
 0.940
Pnap_2911
Tfp pilus assembly protein PilW-like protein; KEGG: bps:BPSL2754 putative membrane protein.
 
  
 0.938
Pnap_2912
Tfp pilus assembly protein PilX-like protein.
  
  
 0.893
Pnap_2909
Pilus assembly protein; KEGG: pol:Bpro_2877 methylation.
 
  
0.849
Pnap_0673
PFAM: Fimbrial assembly family protein; KEGG: pol:Bpro_0782 fimbrial assembly.
 
  
 0.821
Pnap_0676
TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB, short N-terminal domain; KEGG: pol:Bpro_0785 type II and III secretion system protein.
 
   
 0.818
Pnap_2915
5-amino-6-(5-phosphoribosylamino)uracil reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
       0.816
Pnap_0672
TIGRFAM: type IV pilus assembly protein PilM; KEGG: pol:Bpro_0781 type IV pilus assembly protein PilM.
 
   
 0.811
Pnap_0674
PFAM: Pilus assembly protein, PilO; KEGG: pol:Bpro_0783 pilus assembly protein, PilO.
 
   
 0.805
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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