STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_3145Gentisate 1,2-dioxygenase; PFAM: Cupin 2, conserved barrel domain protein; KEGG: eba:ebA1373 gentisate 1,2-dioxygenase. (351 aa)    
Predicted Functional Partners:
nagL
TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase, N-terminal domain; KEGG: eba:ebA1379 maleylpyruvate isomerase.
 
  
 0.977
Pnap_2452
TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase, N-terminal domain; KEGG: eba:ebA1379 maleylpyruvate isomerase.
 
  
 0.937
nagX
3-hydroxybenzoate 6-hydroxylase; Catalyzes the NAD- or NADP-dependent conversion of 3- hydroxybenzoate to gentisate. The affinity of the enzyme toward NAD is twice as high as for NADP.
 
   
 0.920
Pnap_2454
Gentisate 1,2-dioxygenase; PFAM: Cupin 2, conserved barrel domain protein; KEGG: eba:ebA1373 gentisate 1,2-dioxygenase.
  
  
 
0.901
nagI
Gentisate 1,2-dioxygenase; PFAM: Cupin 2, conserved barrel domain protein; KEGG: eba:ebA1373 gentisate 1,2-dioxygenase.
  
  
 
0.901
Pnap_3146
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: eba:ebA1377 fumarylpyruvate hydrolase.
 
   
 0.745
Pnap_3023
PFAM: monooxygenase, FAD-binding; KEGG: pol:Bpro_3591 salicylate 1-monooxygenase.
 
   
 0.733
Pnap_0799
PFAM: thioesterase superfamily protein; KEGG: rfr:Rfer_0270 4-hydroxybenzoyl-CoA thioesterase.
 
     0.584
Pnap_3143
PFAM: regulatory protein, MarR; KEGG: bja:bll0108 transcriptional regulatory protein.
 
     0.563
Pnap_2946
KEGG: pol:Bpro_1626 hypothetical protein.
  
     0.523
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.