STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_3188Exopolysaccharide biosynthesis protein-like protein. (296 aa)    
Predicted Functional Partners:
Pnap_3189
PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: cch:Cag_0665 probable polysaccharide biosynthesis protein.
  
    0.792
Pnap_3187
PFAM: glycosyl transferase, family 2; KEGG: ava:Ava_0268 glycosyl transferase, family 2.
       0.557
Pnap_3176
PFAM: sugar transferase; KEGG: eba:ebA1531 colanic biosynthesis UDP-glucose lipid carrier transferase.
  
  
 0.518
Pnap_3184
KEGG: sha:SH2127 hypothetical protein.
  
    0.450
Pnap_3182
KEGG: bxe:Bxe_C1078 putative acetyltransferase.
  
    0.439
Pnap_3185
PFAM: glycosyl transferase, family 2; KEGG: eli:ELI_12215 glycosyl transferase, group 2 family protein.
  
    0.437
Pnap_2680
PFAM: sugar transferase; KEGG: pol:Bpro_1875 sugar transferase.
  
  
 0.433
Pnap_3181
PFAM: glycosyl transferase, family 2; KEGG: bxe:Bxe_C1077 putative glycosyltransferase.
  
    0.426
Pnap_3183
PFAM: glycosyl transferase, group 1; KEGG: bxe:Bxe_A3856 putative transferase.
  
    0.421
Pnap_3186
KEGG: eli:ELI_12240 hypothetical protein.
       0.411
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.