STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_3224PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pol:Bpro_3845 acyl-CoA dehydrogenase-like. (393 aa)    
Predicted Functional Partners:
Pnap_3225
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: pol:Bpro_3846 acyl-CoA dehydrogenase-like.
     0.993
Pnap_1842
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: pol:Bpro_2573 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
 
 0.899
Pnap_2135
3-hydroxyacyl-CoA dehydrogenase; PFAM: Enoyl-CoA hydratase/isomerase; FAD dependent oxidoreductase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: reu:Reut_B3873 enoyl-CoA hydratase/isomerase:3-hydroxyacyl-CoA dehydrogenase, 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.873
Pnap_1837
PFAM: AMP-dependent synthetase and ligase; KEGG: pol:Bpro_2579 AMP-dependent synthetase and ligase.
 
 
 0.749
Pnap_3476
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: pol:Bpro_3956 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
  
 0.746
Pnap_2944
2,3-dihydro-2,3-dihydroxybenzoyl-CoA ring cleavage enzyme; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pol:Bpro_1628 enoyl-CoA hydratase/isomerase.
  
  0.728
Pnap_3619
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pol:Bpro_0591 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.721
Pnap_0873
PFAM: MaoC domain protein dehydratase; KEGG: pol:Bpro_1240 MaoC-like dehydratase.
 
 0.699
Pnap_1914
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pol:Bpro_2958 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.684
Pnap_0473
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pol:Bpro_4159 enoyl-CoA hydratase/isomerase.
  
  0.680
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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