STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_3283Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. (561 aa)    
Predicted Functional Partners:
Pnap_1223
PFAM: electron transfer flavoprotein beta-subunit; KEGG: pol:Bpro_3143 electron transfer flavoprotein beta-subunit.
 
 0.987
Pnap_2131
PFAM: electron transfer flavoprotein beta-subunit; KEGG: pol:Bpro_3143 electron transfer flavoprotein beta-subunit.
 
 0.987
Pnap_1224
PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: pol:Bpro_3142 electron transfer flavoprotein, alpha subunit.
 
 0.986
Pnap_2132
PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: pol:Bpro_3142 electron transfer flavoprotein, alpha subunit.
 
 0.986
Pnap_2313
PFAM: electron transfer flavoprotein beta-subunit; KEGG: bxe:Bxe_B1436 electron transfer flavoprotein, fix A (beta subunit).
  
 0.955
Pnap_2314
PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: bxe:Bxe_B1435 electron transfer flavoprotein FixB (alpha subunit).
  
 0.950
Pnap_2679
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
 
 
0.888
Pnap_3284
PFAM: MaoC domain protein dehydratase; KEGG: reu:Reut_C6351 MaoC-like dehydratase.
  
 
 0.716
Pnap_3285
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rfr:Rfer_2268 acyl-CoA dehydrogenase-like.
  
 
 0.703
Pnap_0832
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rfr:Rfer_3264 4Fe-4S ferredoxin, iron-sulfur binding.
  
  
 0.643
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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