STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_3521PFAM: Extracellular ligand-binding receptor; KEGG: bxe:Bxe_A3706 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; TC 3.A.1.4.-. (400 aa)    
Predicted Functional Partners:
Pnap_3519
Branched-chain amino acid transport system ATP-binding protein; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A3708 ABC branched chain amino acid family transporter, fused ATPase and inner membrane subunit; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.944
Pnap_3520
PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A3707 ABC branched chain amino acid family transporter, inner membrane subunit; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
    0.915
Pnap_3518
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A3709 ABC branched chain amino acid family transporter, ATPase subunit; TC 3.A.1.4.-.
 
  
 0.898
Pnap_2713
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: bpa:BPP2196 putative ABC transport system, membrane protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.733
Pnap_0802
Branched-chain amino acid transport system permease protein; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_0267 ABC transporter related; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.709
Pnap_3208
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: pol:Bpro_3796 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
    0.696
Pnap_1616
Branched-chain amino acid transport system permease protein; PFAM: inner-membrane translocator; KEGG: pol:Bpro_3084 inner-membrane translocator; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.693
Pnap_3207
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: pol:Bpro_3795 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
    0.687
Pnap_1651
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: pol:Bpro_1849 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
    0.667
Pnap_1652
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: pol:Bpro_1850 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
    0.652
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.