STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_3691Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_1096 binding-protein-dependent transport systems inner membrane component; TC 3.A.1.1.-. (293 aa)    
Predicted Functional Partners:
Pnap_3692
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_1095 binding-protein-dependent transport systems inner membrane component; TC 3.A.1.1.-.
 0.998
Pnap_3693
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rfr:Rfer_1094 ABC transporter related; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily.
 
 0.998
Pnap_3689
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: extracellular solute-binding protein, family 1; KEGG: rfr:Rfer_1097 extracellular solute-binding protein, family 1; TC 3.A.1.1.-.
 
 0.988
Pnap_0523
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: extracellular solute-binding protein, family 1; KEGG: rfr:Rfer_1097 extracellular solute-binding protein, family 1; TC 3.A.1.1.-.
 
 0.979
Pnap_0231
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: hch:HCH_06906 ABC-type sugar transport system, ATPase components; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily.
 
 
 0.967
Pnap_0230
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_pAT_376 sugar ABC transporter, permease protein; TC 3.A.1.1.-.
 
 0.955
Pnap_0227
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: extracellular solute-binding protein, family 1; KEGG: atc:AGR_pAT_379 putative sugar transport sugar binding protein; TC 3.A.1.1.-.
 
 
 0.722
Pnap_0228
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: extracellular solute-binding protein, family 1; KEGG: atc:AGR_pAT_379 putative sugar transport sugar binding protein; TC 3.A.1.1.-.
 
 
 0.713
Pnap_3690
KEGG: cvi:CV3298 maltoporin precursor.
  
  
 0.648
Pnap_0232
PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: atc:AGR_pTi_251 sucrose phosphorylase SplA.
 
  
 0.551
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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