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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_3705TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Collagen triple helix repeat; filamentous haemagglutinin domain protein; KEGG: mlo:mlr0585 hypothetical glycine-rich protein. (1105 aa)    
Predicted Functional Partners:
Pnap_3704
PFAM: surface antigen (D15); Polypeptide-transport-associated domain protein, ShlB-type; KEGG: par:Psyc_1782 putative heme-hemopexin utilization protein B.
 
 
 0.926
Pnap_4013
PFAM: surface antigen (D15); Polypeptide-transport-associated domain protein, ShlB-type; KEGG: pfl:PFL_2820 outer membrane protein, OMP85 family.
 
 
 0.782
Pnap_1888
PFAM: lipolytic enzyme, G-D-S-L family; KEGG: pol:Bpro_3031 arylesterase.
  
 
 0.550
Pnap_3706
KEGG: par:Psyc_1780 hypothetical protein.
       0.503
Pnap_2224
PFAM: Allergen V5/Tpx-1 family protein; KEGG: rfr:Rfer_4490 allergen V5/TPX-1 related.
  
    0.478
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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