Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Pnap_3705 | Pnap_3706 | TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Collagen triple helix repeat; filamentous haemagglutinin domain protein; KEGG: mlo:mlr0585 hypothetical glycine-rich protein. | KEGG: par:Psyc_1780 hypothetical protein. | 0.503 |
Pnap_3706 | Pnap_3705 | KEGG: par:Psyc_1780 hypothetical protein. | TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Collagen triple helix repeat; filamentous haemagglutinin domain protein; KEGG: mlo:mlr0585 hypothetical glycine-rich protein. | 0.503 |
Pnap_3706 | Pnap_3707 | KEGG: par:Psyc_1780 hypothetical protein. | PFAM: glycosyl transferase, family 2; KEGG: pcu:pc0452 hypothetical protein. | 0.476 |
Pnap_3707 | Pnap_3706 | PFAM: glycosyl transferase, family 2; KEGG: pcu:pc0452 hypothetical protein. | KEGG: par:Psyc_1780 hypothetical protein. | 0.476 |