STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_3841PFAM: thioesterase superfamily protein; KEGG: pol:Bpro_4578 thioesterase superfamily. (149 aa)    
Predicted Functional Partners:
Pnap_3840
PFAM: peptidase M19, renal dipeptidase; KEGG: hypothetical protein.
  
    0.674
Pnap_3838
4-cresol dehydrogenase (hydroxylating); PFAM: FAD linked oxidase domain protein; KEGG: eba:ebA3165 probable p-cresol methylhydroxylase subunit.
   
   0.582
Pnap_3839
KEGG: eba:ebA5757 conserved hypothetical protein, possibly involved in regulation of phenolics degradation.
       0.571
Pnap_3837
KEGG: noc:Noc_2407 hypothetical protein.
       0.485
Pnap_3836
KEGG: eba:ebB97 probable p-cresol methylhydroxylase subunit.
       0.468
Pnap_2935
PFAM: protein of unknown function DUF6, transmembrane; KEGG: ppr:PBPRB0783 hypothetical protein.
 
      0.435
Pnap_3835
PFAM: aldehyde dehydrogenase; KEGG: bte:BTH_I0706 aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
   
 
 0.426
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.