STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_3916PFAM: protein of unknown function DUF1289; KEGG: pol:Bpro_4664 protein of unknown function DUF1289. (136 aa)    
Predicted Functional Partners:
Pnap_0099
PFAM: metallophosphoesterase; KEGG: pol:Bpro_0155 metallophosphoesterase.
  
     0.684
Pnap_0760
PFAM: General secretion pathway protein K; KEGG: pol:Bpro_1325 general secretion pathway protein K.
  
     0.645
Pnap_0762
TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: pol:Bpro_1323 general secretion pathway protein I.
  
     0.587
Pnap_0665
PFAM: ResB family protein; KEGG: pol:Bpro_0773 ResB-like.
  
     0.576
Pnap_0883
KEGG: pol:Bpro_1250 putative transmembrane protein.
  
     0.572
Pnap_0438
PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_4211 GCN5-related N-acetyltransferase.
  
    0.538
Pnap_0517
KEGG: pol:Bpro_4088 dihydroneopterin aldolase.
  
     0.531
Pnap_3915
KEGG: pol:Bpro_4663 hypothetical protein.
       0.530
Pnap_3087
PFAM: HemY domain protein; KEGG: pol:Bpro_3661 putative porphyrin biosynthesis related protein.
  
     0.508
Pnap_2798
KEGG: pol:Bpro_1787 hypothetical protein.
  
     0.503
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.