STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_3942PFAM: O-antigen polymerase; KEGG: pol:Bpro_4672 O-antigen polymerase. (506 aa)    
Predicted Functional Partners:
Pnap_2680
PFAM: sugar transferase; KEGG: pol:Bpro_1875 sugar transferase.
  
  
 0.823
Pnap_3176
PFAM: sugar transferase; KEGG: eba:ebA1531 colanic biosynthesis UDP-glucose lipid carrier transferase.
  
  
 0.823
Pnap_1815
ZipA, C-terminal FtsZ-binding region; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.694
Pnap_0194
PFAM: VanZ family protein; KEGG: pol:Bpro_0247 VanZ like protein.
 
     0.692
Pnap_0830
KEGG: pol:Bpro_0932 hypothetical protein.
  
    0.651
Pnap_3192
Mannose-6-phosphate isomerase, type 2; KEGG: pfl:PFL_5483 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein.
  
  
 0.634
Pnap_3496
PFAM: regulatory protein, TetR; KEGG: pol:Bpro_4025 transcriptional regulator, TetR family.
  
     0.617
Pnap_2541
PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: pol:Bpro_2709 OmpA-like transmembrane region.
 
   
 0.614
Pnap_0704
KEGG: rfr:Rfer_2954 putative transmembrane protein.
  
     0.601
Pnap_3441
PFAM: NUDIX hydrolase; beta-lactamase domain protein; KEGG: pol:Bpro_1055 beta-lactamase-like.
  
    0.586
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.