STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_3950PFAM: protein phosphatase 2C domain protein; KEGG: pol:Bpro_4678 protein serine/threonine phosphatases. (261 aa)    
Predicted Functional Partners:
Pnap_3949
PFAM: Forkhead-associated protein; KEGG: pol:Bpro_4677 FHA domain containing protein.
 
 
 0.911
Pnap_0813
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: pol:Bpro_1337 serine/threonine protein kinase.
 
 
 0.857
Pnap_1784
TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: pol:Bpro_2669 dihydrolipoamide dehydrogenase.
  
 0.756
Pnap_1786
PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rfr:Rfer_2214 dihydrolipoamide dehydrogenase.
  
 0.756
Pnap_4054
PFAM: protein kinase; GAF domain protein; ATP-binding region, ATPase domain protein domain protein; SMART: serine/threonine protein kinase; KEGG: mxa:MXAN_4053 sensor histidine kinase.
 
 
 0.679
Pnap_2683
TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; KEGG: pol:Bpro_1868 glycine cleavage system T protein.
   
 0.624
Pnap_1410
PFAM: protein kinase; protein phosphatase 2C domain protein; SMART: serine/threonine protein kinase; KEGG: pol:Bpro_3274 protein serine/threonine phosphatases.
 
 
0.571
Pnap_1994
Putative adenylate/guanylate cyclase; PFAM: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: pol:Bpro_2451 putative adenylate/guanylate cyclase.
 
 
 0.556
Pnap_3217
PFAM: Fmu (Sun) domain protein; KEGG: pol:Bpro_3805 Fmu (Sun).
 
 
 0.522
Pnap_1957
PFAM: Enoyl-CoA hydratase/isomerase; formyl transferase domain protein; KEGG: rme:Rmet_1541 formyl transferase-like protein.
  
   0.511
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.