STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_3970PFAM: NnrS family protein; KEGG: pol:Bpro_4727 NnrS. (398 aa)    
Predicted Functional Partners:
Pnap_1304
PFAM: globin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pol:Bpro_3408 globin; Belongs to the globin family.
  
  
 0.813
Pnap_3969
KEGG: pol:Bpro_4720 hypothetical protein.
 
     0.734
Pnap_1328
Nitric oxide reductase, NorZ apoprotein; KEGG: rfr:Rfer_1886 putative nitric oxide reductase (subunit B) transmembrane protein.
 
  
 0.632
Pnap_1330
PFAM: Invasion gene expression up-regulator, SirB; KEGG: eba:ebB180 predicted invasion gene expression up-regulator, SirB.
 
     0.462
Pnap_3759
TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase, delta subunit; KEGG: pol:Bpro_4593 nitrate reductase molybdenum cofactor assembly chaperone.
 
     0.460
Pnap_3758
TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase, gamma subunit; KEGG: rfr:Rfer_2795 respiratory nitrate reductase, gamma subunit.
 
     0.452
Pnap_1327
TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: tbd:Tbd_2014 hypothetical protein.
 
  
 0.450
Pnap_3761
TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: pol:Bpro_4595 nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   
 0.430
Pnap_3961
KEGG: sil:SPO1521 regulatory protein, putative.
 
  
 0.427
Pnap_2637
PFAM: FMN-binding domain protein; KEGG: sil:SPO1521 regulatory protein, putative.
 
  
 0.426
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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