STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_4013PFAM: surface antigen (D15); Polypeptide-transport-associated domain protein, ShlB-type; KEGG: pfl:PFL_2820 outer membrane protein, OMP85 family. (538 aa)    
Predicted Functional Partners:
Pnap_4014
TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; KEGG: rso:RS03099 putative hemagglutinin-related protein.
 
 
 0.950
Pnap_3705
TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Collagen triple helix repeat; filamentous haemagglutinin domain protein; KEGG: mlo:mlr0585 hypothetical glycine-rich protein.
 
 
 0.782
Pnap_4015
Hypothetical protein.
       0.712
Pnap_0863
KEGG: pol:Bpro_1227 hypothetical protein.
  
     0.618
Pnap_1055
KEGG: tbd:Tbd_0127 outer membrane protein.
  
   
 0.572
Pnap_3899
PFAM: regulatory protein, TetR; KEGG: mca:MCA1807 transcriptional regulator, TetR family.
  
     0.562
Pnap_4012
PFAM: protein of unknown function DUF1232; KEGG: pol:Bpro_2926 hypothetical protein.
       0.419
Pnap_0409
KEGG: reu:Reut_C5975 transposase, IS4.
  
  
 0.407
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.