Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Rta_00930Thioredoxin-disulfide reductase-like protein. (295 aa)    
Predicted Functional Partners:
Rta_00940
Transcriptional regulator, Rrf2 family-like protein.
 
     0.943
trxA
Candidate thioredoxin 1; Belongs to the thioredoxin family.
  
 
 0.736
Rta_00950
Conserved hypothetical protein.
       0.576
Rta_00960
Hypothetical protein.
       0.550
uraA
Candidate xanthine/uracil permease.
       0.547
ahpC
Candidate alkyl hydroperoxide reductase C component; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
 
 
 0.524
Rta_00910
Conserved hypothetical protein.
       0.508
Rta_00970
Transcriptional regulator, TetR family-like protein.
 
     0.491
Rta_36760
Thioredoxin-like protein.
  
 
 0.466
trxC
Candidate thioredoxin 2.
  
 
 0.460
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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