Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
adhCGlutathione-dependent formaldehyde dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (368 aa)    
Predicted Functional Partners:
Rta_01040
Esterase, Carbohydrate Esterase Family 1-like protein; Serine hydrolase involved in the detoxification of formaldehyde.
 0.999
tadA
Candidate bifunctional protein : haloalkane dehalogenase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
 0.949
Rta_02500
Candidate NADP-dependent alcohol dehydrogenase.
    
 0.940
Rta_01090
Esterase, Carbohydrate Esterase Family 1-like protein.
 
 
 0.936
Rta_01070
Hypothetical protein.
 
  
 
0.921
Rta_23090
Aldehyde dehydrogenase (NAD+)-like protein; Belongs to the aldehyde dehydrogenase family.
  
 0.918
Rta_01080
Esterase, Carbohydrate Esterase Family 1-like protein.
 
 
 0.905
Rta_26540
Conserved hypothetical protein.
  
 
 0.706
Rta_01020
Candidate transporter.
       0.555
Rta_19890
Alcohol dehydrogenase (Aldehyde reductase)-like protein.
    
 
 0.512
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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