Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rta_01740Pentachlorophenol 4-monooxygenase-like protein. (519 aa)    
Predicted Functional Partners:
Rta_31330
Pentachlorophenol 4-monooxygenase (Pentachlorophenol hydroxylase)-like protein.
  
  
 
0.921
Rta_07500
Conserved hypothetical protein.
 
    0.827
Rta_31340
Conserved hypothetical protein.
 
    0.805
Rta_01730
Hypothetical protein.
       0.773
tctC-5
Candidate extracytoplasmic binding receptor.
  
    0.768
Rta_01770
Candidate OHED hydratase.
  
  
 0.755
Rta_01780
5-carboxymethyl-2-hydroxymuconate delta-isomerase-like protein.
     
 0.749
Rta_01760
Candidate 4-hydroxy-2-oxovalerate aldolase; Belongs to the HpcH/HpaI aldolase family.
     
 0.727
Rta_01710
Candidate aldolase class II protein.
       0.722
hpcB
Candidate 3,4-dihydroxyphenylacetate 2,3-dioxygenase.
  
  
 0.722
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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