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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Assay-based Predictions
experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
Rta_017805-carboxymethyl-2-hydroxymuconate delta-isomerase-like protein. (135 aa)    
Predicted Functional Partners:
Rta_01820
Candidate 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase.
 
 
 0.986
hpcB
Candidate 3,4-dihydroxyphenylacetate 2,3-dioxygenase.
 
  
 0.972
Rta_01810
Candidate 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase.
 
 
 0.970
hpcC
Candidate 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.969
Rta_01770
Candidate OHED hydratase.
 
  
 0.963
Rta_01760
Candidate 4-hydroxy-2-oxovalerate aldolase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.959
Rta_24750
Candidate 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase.
  
  
  0.911
hpcR
Candidate transcriptional regulator HpcR (Homoprotocatechuate degradative operon repressor), MarR family.
 
   
 0.843
ilvD
Candidate Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
       0.773
Rta_01740
Pentachlorophenol 4-monooxygenase-like protein.
     
 0.749
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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