rpoN protein (Ramlibacter tataouinensis) - STRING interaction network

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Score

rpoN

Candidate RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (521 aa)

Predicted Functional Partners:

Rta_34510

0.956

Rta_34420

0.953

rpoN-2

0.910

Rta_34500

0.906

Rta_34400

0.904

lptA

0.830

Rta_02820

0.828

Rta_02840

0.801

prpR

0.796

Rta_15610

0.795

Your Current Organism:

Ramlibacter tataouinensis

NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Rta_02820	Rta_02840	Rta_02820	Rta_02840	Candidate ATP-binding component of an ABC transporter, unknown function.	N6-adenine-specific DNA methylase-like protein; Belongs to the methyltransferase superfamily.	0.841
Rta_02820	lptA	Rta_02820	Rta_02810	Candidate ATP-binding component of an ABC transporter, unknown function.	Conserved hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane.	0.978
Rta_02820	rpoN	Rta_02820	Rta_02830	Candidate ATP-binding component of an ABC transporter, unknown function.	Candidate RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.828
Rta_02840	Rta_02820	Rta_02840	Rta_02820	N6-adenine-specific DNA methylase-like protein; Belongs to the methyltransferase superfamily.	Candidate ATP-binding component of an ABC transporter, unknown function.	0.841
Rta_02840	lptA	Rta_02840	Rta_02810	N6-adenine-specific DNA methylase-like protein; Belongs to the methyltransferase superfamily.	Conserved hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane.	0.856
Rta_02840	rpoN	Rta_02840	Rta_02830	N6-adenine-specific DNA methylase-like protein; Belongs to the methyltransferase superfamily.	Candidate RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.801
Rta_15610	rpoN	Rta_15610	Rta_02830	Signal transduction protein : sensor, PAS domain; transcriptional regulator, Fis family-like protein.	Candidate RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.795
Rta_15610	rpoN-2	Rta_15610	Rta_10250	Signal transduction protein : sensor, PAS domain; transcriptional regulator, Fis family-like protein.	Candidate RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.796
Rta_34400	Rta_34420	Rta_34400	Rta_34420	Candidate histidine kinase, classic.	Candidate response regulator, NtrC.	0.984
Rta_34400	rpoN	Rta_34400	Rta_02830	Candidate histidine kinase, classic.	Candidate RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.904
Rta_34400	rpoN-2	Rta_34400	Rta_10250	Candidate histidine kinase, classic.	Candidate RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.904
Rta_34420	Rta_34400	Rta_34420	Rta_34400	Candidate response regulator, NtrC.	Candidate histidine kinase, classic.	0.984
Rta_34420	rpoN	Rta_34420	Rta_02830	Candidate response regulator, NtrC.	Candidate RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.953
Rta_34420	rpoN-2	Rta_34420	Rta_10250	Candidate response regulator, NtrC.	Candidate RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.953
Rta_34500	Rta_34510	Rta_34500	Rta_34510	Candidate histidine kinase, classic.	Candidate response regulator, NtrC.	0.981
Rta_34500	rpoN	Rta_34500	Rta_02830	Candidate histidine kinase, classic.	Candidate RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.906
Rta_34500	rpoN-2	Rta_34500	Rta_10250	Candidate histidine kinase, classic.	Candidate RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.906
Rta_34510	Rta_34500	Rta_34510	Rta_34500	Candidate response regulator, NtrC.	Candidate histidine kinase, classic.	0.981
Rta_34510	rpoN	Rta_34510	Rta_02830	Candidate response regulator, NtrC.	Candidate RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.956
Rta_34510	rpoN-2	Rta_34510	Rta_10250	Candidate response regulator, NtrC.	Candidate RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.956

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