STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rta_03100Hypothetical protein. (282 aa)    
Predicted Functional Partners:
Rta_03110
Glutathione S-transferase (Glutathione transferase)-like protein; Belongs to the GST superfamily.
       0.773
Rta_13770
Conserved hypothetical protein.
  
     0.736
Rta_03090
Candidate carboxymethylenebutenolidase (dienelactone hydrolase).
       0.681
Rta_36530
Hypothetical protein.
  
     0.662
Rta_01980
Candidate Permeases of the drug/metabolite transporter (DMT) superfamily.
  
     0.638
Rta_13830
Conserved hypothetical protein.
  
     0.622
Rta_18000
Phthalate 4,5-dioxygenase (Phthalate dioxygenase)-like protein.
  
     0.602
Rta_29470
Hypothetical protein.
  
     0.572
Rta_31760
Conserved hypothetical protein.
  
     0.567
Rta_32470
Candidate 4-hydroxybenzoyl-CoA thioesterase.
  
     0.564
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.