Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pbp2Candidate cell division penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. (686 aa)    
Predicted Functional Partners:
rodA
Candidate rod shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
 0.996
mreC
Candidate cell shape-determining protein; Involved in formation and maintenance of cell shape.
 
 
 0.987
mreB
Candidate cell morphogenesis actin-like ATPase.
 
 
 
 0.975
mtgA
Candidate monofunctional peptidoglycan glycosyltransferase, Glycosyltransferase Family 51; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
 
 
 0.974
Rta_00530
Monofunctional peptidoglycan glycosyltransferase, Glycosyltransferase Family 51-like protein; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family.
 
 
 0.966
Rta_17110
Penicillin-binding protein 1A; Candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase (candidate murein polymerase), Glycosyltransferase Family 51.
  
 
 0.962
ftsW
Candidate cell division protein (division cell wall cluster); Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily.
 
 0.955
Rta_07950
Penicillin-binding protein 1A; Candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase (candidate murein polymerase), Glycosyltransferase Family 51.
  
 
0.944
dac
Candidate penicillin-binding protein precursor (D-alanyl-D-alanine carboxypeptidase); Belongs to the peptidase S11 family.
 
 
 0.939
mreD
Candidate cell shape-determining, membrane protein.
 
  
 0.937
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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