| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Rta_03900 | pyrE | Rta_03900 | Rta_03880 | Candidate ABC transporter, periplasmic component, uncharacterized transport function. | Candidate Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.459 |
| Rta_03900 | xthC | Rta_03900 | Rta_03890 | Candidate ABC transporter, periplasmic component, uncharacterized transport function. | Candidate exodeoxyribonuclease III. | 0.625 |
| Rta_10950 | nth | Rta_10950 | Rta_16580 | DNA-3-methyladenine-glycosylase II-like protein; Fusion protein AdaA/AlkA : methylphosphotriester-DNA alkyltransferase and transcriptional regulator, AraC family; DNA-3-methyladenine- glycosylase II-like protein. | Candidate endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.524 |
| Rta_10950 | polA | Rta_10950 | Rta_12840 | DNA-3-methyladenine-glycosylase II-like protein; Fusion protein AdaA/AlkA : methylphosphotriester-DNA alkyltransferase and transcriptional regulator, AraC family; DNA-3-methyladenine- glycosylase II-like protein. | Candidate DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.639 |
| Rta_10950 | xthA | Rta_10950 | Rta_14470 | DNA-3-methyladenine-glycosylase II-like protein; Fusion protein AdaA/AlkA : methylphosphotriester-DNA alkyltransferase and transcriptional regulator, AraC family; DNA-3-methyladenine- glycosylase II-like protein. | Candidate exodeoxyribonuclease III. | 0.645 |
| Rta_10950 | xthB | Rta_10950 | Rta_20710 | DNA-3-methyladenine-glycosylase II-like protein; Fusion protein AdaA/AlkA : methylphosphotriester-DNA alkyltransferase and transcriptional regulator, AraC family; DNA-3-methyladenine- glycosylase II-like protein. | Candidate exodeoxyribonuclease III. | 0.645 |
| Rta_10950 | xthC | Rta_10950 | Rta_03890 | DNA-3-methyladenine-glycosylase II-like protein; Fusion protein AdaA/AlkA : methylphosphotriester-DNA alkyltransferase and transcriptional regulator, AraC family; DNA-3-methyladenine- glycosylase II-like protein. | Candidate exodeoxyribonuclease III. | 0.645 |
| dnaN | mutY | Rta_00020 | Rta_33220 | Candidate DNA polymerase III sliding clamp subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required [...] | Candidate A/G-specific adenine glycosylase protein; Adenine glycosylase active on G-A mispairs. | 0.802 |
| dnaN | polA | Rta_00020 | Rta_12840 | Candidate DNA polymerase III sliding clamp subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required [...] | Candidate DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.976 |
| dnaN | ung | Rta_00020 | Rta_35780 | Candidate DNA polymerase III sliding clamp subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required [...] | Candidate uracil DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.832 |
| dnaN | xthA | Rta_00020 | Rta_14470 | Candidate DNA polymerase III sliding clamp subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required [...] | Candidate exodeoxyribonuclease III. | 0.739 |
| dnaN | xthB | Rta_00020 | Rta_20710 | Candidate DNA polymerase III sliding clamp subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required [...] | Candidate exodeoxyribonuclease III. | 0.739 |
| dnaN | xthC | Rta_00020 | Rta_03890 | Candidate DNA polymerase III sliding clamp subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required [...] | Candidate exodeoxyribonuclease III. | 0.739 |
| mutY | dnaN | Rta_33220 | Rta_00020 | Candidate A/G-specific adenine glycosylase protein; Adenine glycosylase active on G-A mispairs. | Candidate DNA polymerase III sliding clamp subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required [...] | 0.802 |
| mutY | polA | Rta_33220 | Rta_12840 | Candidate A/G-specific adenine glycosylase protein; Adenine glycosylase active on G-A mispairs. | Candidate DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.459 |
| mutY | ung | Rta_33220 | Rta_35780 | Candidate A/G-specific adenine glycosylase protein; Adenine glycosylase active on G-A mispairs. | Candidate uracil DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.405 |
| mutY | xthA | Rta_33220 | Rta_14470 | Candidate A/G-specific adenine glycosylase protein; Adenine glycosylase active on G-A mispairs. | Candidate exodeoxyribonuclease III. | 0.656 |
| mutY | xthB | Rta_33220 | Rta_20710 | Candidate A/G-specific adenine glycosylase protein; Adenine glycosylase active on G-A mispairs. | Candidate exodeoxyribonuclease III. | 0.656 |
| mutY | xthC | Rta_33220 | Rta_03890 | Candidate A/G-specific adenine glycosylase protein; Adenine glycosylase active on G-A mispairs. | Candidate exodeoxyribonuclease III. | 0.656 |
| nth | Rta_10950 | Rta_16580 | Rta_10950 | Candidate endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | DNA-3-methyladenine-glycosylase II-like protein; Fusion protein AdaA/AlkA : methylphosphotriester-DNA alkyltransferase and transcriptional regulator, AraC family; DNA-3-methyladenine- glycosylase II-like protein. | 0.524 |
