Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rta_04000NADH dehydrogenase-like protein. (366 aa)    
Predicted Functional Partners:
selD
Selenium donor protein; Synthesizes selenophosphate from selenide and ATP.
     0.913
Rta_03980
Candidate mercuric reductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
 
  
 0.875
Rta_03990
Hypothetical protein.
 
     0.805
Rta_03970
(S)-2-haloacid dehalogenase-like protein.
       0.773
Rta_03960
Transcriptional regulator, AraC family-like protein.
       0.692
Rta_03940
Candidate b-glycosyltransferase, Glycosyltransferase Family 2.
 
    0.686
ctaC
Candidate Cytochrome c oxidase polypeptide II precursor (Cytochrome aa3 subunit 2).
  
 
 0.584
gpmA
Candidate 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (Phosphoglyceromutase); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
    
   0.563
glpD
Candidate Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.506
Rta_03950
Hypothetical protein.
       0.451
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.