Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rta_04580Candidate b-glycosidase, Glycoside Hydrolase Family 1; Belongs to the glycosyl hydrolase 1 family. (418 aa)    
Predicted Functional Partners:
Rta_32800
A-glycosyltransferase, Glycosyltransferase Family 4-like protein.
 
   
 0.971
Rta_12940
Conserved hypothetical protein.
  
     0.677
glf
Candidate UDP-galactopyranose mutase.
 
     0.626
Rta_12920
Conserved hypothetical protein.
  
     0.626
Rta_20700
Hypothetical protein.
  
     0.606
Rta_05020
Candidate b-glycosidase, Glycoside Hydrolase Family 2; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.600
Rta_04570
Conserved hypothetical protein.
       0.581
Rta_06330
Conserved hypothetical protein.
  
     0.575
Rta_04300
Hypothetical protein.
  
     0.566
Rta_20690
Hypothetical protein.
  
     0.556
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.