Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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Rta_04650Lactoylglutathione lyase (Aldoketomutase)-like protein; (Ketone-aldehyde mutase) (Glyoxalase I) (Methylglyoxalase). (126 aa)    
Predicted Functional Partners:
Rta_04655
Conserved hypothetical protein.
     
 0.748
Rta_04656
Hypothetical protein.
       0.586
Rta_04660
Conserved hypothetical protein.
       0.586
Rta_04647
Transcriptional regulator, MarR family-like protein.
 
   
 0.585
icmF
Candidate methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
  
 0.546
Rta_21500
Glutathione S-transferase (Glutathione transferase)-like protein.
  
  
 0.530
Rta_24620
Conserved hypothetical protein.
  
  
 0.524
tadA
Candidate bifunctional protein : haloalkane dehalogenase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
  
 0.496
nuoI
Candidate NADH:ubiquinone oxidoreductase subunit 9 or 23 kDa subunit, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  
 0.479
Rta_33320
Ferredoxin-like protein.
  
  
 0.479
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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