Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
Rta_04830Cyclopropane-fatty-acyl-phospholipid synthase-like protein. (289 aa)    
Predicted Functional Partners:
Rta_37170
NAD/FAD-binding protein-like protein.
  
 0.874
Rta_04840
Polyketide synthase protein-like protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.732
Rta_37180
Conserved hypothetical protein.
  
 0.717
Rta_04820
Conserved hypothetical protein.
     
 0.692
Rta_04810
Fatty acid desaturase, membrane protein-like protein.
 
     0.680
Rta_04850
Conserved hypothetical protein.
       0.643
Rta_04860
acyl-CoA ligase (acyl-CoA synthetase)-like protein.
 
   
 0.589
Rta_25550
Candidate membrane protein.
 
     0.465
Rta_30410
Polyketide synthase-like protein.
  
  
 0.462
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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