Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
glfCandidate UDP-galactopyranose mutase. (401 aa)    
Predicted Functional Partners:
Rta_32800
A-glycosyltransferase, Glycosyltransferase Family 4-like protein.
  
 0.981
Rta_05050
Candidate b-glycosidase, Glycoside Hydrolase Family 1; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
 
  
 0.968
Rta_05030
Gal-1-P uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
 
  
  0.928
galE
UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.928
galE-2
UDP- galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
 0.915
rmlA1
dTDP-glucose pyrophosphorylase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.886
Rta_10900
Candidate succinoglycan transport protein.
  
  
 0.882
ugd
Candidate UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase).
  
  
 0.878
rfbB
Candidate dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.852
Rta_08900
Candidate b-glycosyltransferase, Glycosyltransferase Family 2.
 
  
 0.840
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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