Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tkrACandidate Gluconate 2-dehydrogenase (2-ketogluconate reductase); Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (325 aa)    
Predicted Functional Partners:
Rta_05230
Candidate 2-dehydro-3-deoxygluconokinase.
 
 
 0.988
idnK
Candidate thermosensitive gluconokinase (Gluconate kinase 1).
    
 0.905
edd
Candidate phosphogluconate dehydratase (6-phosphogluconate dehydratase); Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
    
 0.901
Rta_05220
Conserved hypothetical protein.
 
    0.876
Rta_05210
Candidate ABC type amino acid transport system, ATP-binding component.
       0.777
Rta_05200
Candidate ABC type amino acid transport system, periplasmic component.
     
 0.715
Rta_05170
Transcriptional regulator, LacI family-like protein.
 
    0.621
Rta_05180
Candidate ABC type amino acid transport system, permease component.
  
    0.610
Rta_05190
Candidate ABC type amino acid transport system, permease component.
  
    0.610
Rta_05250
Creatinine amidohydrolase (Creatininase)-like protein.
       0.475
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.