Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rta_05750Conserved hypothetical protein. (226 aa)    
Predicted Functional Partners:
Rta_05745
Conserved hypothetical protein; Belongs to the UPF0225 family.
 
     0.708
dalD
Candidate D-arabinitol 4-dehydrogenase.
    
 0.633
Rta_05720
Unsaturated acyl-CoA reductaseButyryl dehydrogenase.
     
 0.624
trkG
Candidate membrane component of K+ transport systems; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.
     
 0.624
trkA
Candidate NAD binding component of K+ transport system.
       0.620
Rta_05760
Hypothetical protein.
       0.620
Rta_05700
Conserved hypothetical protein.
       0.604
Rta_05710
Conserved hypothetical protein.
       0.604
Rta_05680
Acetyl-CoA C-acetyltransferase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.517
Rta_05690
Oxidoreductases-like protein.
   
 
 0.502
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.