Rta_05900 protein (Ramlibacter tataouinensis)

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Rta_05900

Ribosomal large subunit pseudouridine synthase (rRNA pseudouridylate synthase)-like protein. (199 aa)

Predicted Functional Partners:

cmk

0.722

engA

0.525

xthC

0.523

xthA

0.523

xthB

0.523

scpB

0.520

tctC-10

0.497

Rta_05890

0.493

Rta_24520

0.443

rsuA

0.436

Your Current Organism:

Ramlibacter tataouinensis

NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Rta_05890	Rta_05900	Rta_05890	Rta_05900	Transcriptional regulator, LysR family-like protein; Belongs to the LysR transcriptional regulatory family.	Ribosomal large subunit pseudouridine synthase (rRNA pseudouridylate synthase)-like protein.	0.493
Rta_05900	Rta_05890	Rta_05900	Rta_05890	Ribosomal large subunit pseudouridine synthase (rRNA pseudouridylate synthase)-like protein.	Transcriptional regulator, LysR family-like protein; Belongs to the LysR transcriptional regulatory family.	0.493
Rta_05900	Rta_24520	Rta_05900	Rta_24520	Ribosomal large subunit pseudouridine synthase (rRNA pseudouridylate synthase)-like protein.	Conserved hypothetical protein.	0.443
Rta_05900	cmk	Rta_05900	Rta_13650	Ribosomal large subunit pseudouridine synthase (rRNA pseudouridylate synthase)-like protein.	Deoxycytidine kinase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate; Belongs to the cytidylate kinase family. Type 1 subfamily.	0.722
Rta_05900	engA	Rta_05900	Rta_18980	Ribosomal large subunit pseudouridine synthase (rRNA pseudouridylate synthase)-like protein.	Candidate GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	0.525
Rta_05900	rsuA	Rta_05900	Rta_14360	Ribosomal large subunit pseudouridine synthase (rRNA pseudouridylate synthase)-like protein.	rRNA-uridine isomerase A; Belongs to the pseudouridine synthase RsuA family.	0.436
Rta_05900	scpB	Rta_05900	Rta_18880	Ribosomal large subunit pseudouridine synthase (rRNA pseudouridylate synthase)-like protein.	Candidate segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.	0.520
Rta_05900	tctC-10	Rta_05900	Rta_05910	Ribosomal large subunit pseudouridine synthase (rRNA pseudouridylate synthase)-like protein.	Candidate extracytoplasmic binding receptor.	0.497
Rta_05900	xthA	Rta_05900	Rta_14470	Ribosomal large subunit pseudouridine synthase (rRNA pseudouridylate synthase)-like protein.	Candidate exodeoxyribonuclease III.	0.523
Rta_05900	xthB	Rta_05900	Rta_20710	Ribosomal large subunit pseudouridine synthase (rRNA pseudouridylate synthase)-like protein.	Candidate exodeoxyribonuclease III.	0.523
Rta_05900	xthC	Rta_05900	Rta_03890	Ribosomal large subunit pseudouridine synthase (rRNA pseudouridylate synthase)-like protein.	Candidate exodeoxyribonuclease III.	0.523
Rta_24520	Rta_05900	Rta_24520	Rta_05900	Conserved hypothetical protein.	Ribosomal large subunit pseudouridine synthase (rRNA pseudouridylate synthase)-like protein.	0.443
cmk	Rta_05900	Rta_13650	Rta_05900	Deoxycytidine kinase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate; Belongs to the cytidylate kinase family. Type 1 subfamily.	Ribosomal large subunit pseudouridine synthase (rRNA pseudouridylate synthase)-like protein.	0.722
cmk	engA	Rta_13650	Rta_18980	Deoxycytidine kinase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate; Belongs to the cytidylate kinase family. Type 1 subfamily.	Candidate GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	0.891
cmk	rsuA	Rta_13650	Rta_14360	Deoxycytidine kinase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate; Belongs to the cytidylate kinase family. Type 1 subfamily.	rRNA-uridine isomerase A; Belongs to the pseudouridine synthase RsuA family.	0.749
cmk	scpB	Rta_13650	Rta_18880	Deoxycytidine kinase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate; Belongs to the cytidylate kinase family. Type 1 subfamily.	Candidate segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.	0.804
engA	Rta_05900	Rta_18980	Rta_05900	Candidate GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Ribosomal large subunit pseudouridine synthase (rRNA pseudouridylate synthase)-like protein.	0.525
engA	cmk	Rta_18980	Rta_13650	Candidate GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Deoxycytidine kinase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate; Belongs to the cytidylate kinase family. Type 1 subfamily.	0.891
engA	rsuA	Rta_18980	Rta_14360	Candidate GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	rRNA-uridine isomerase A; Belongs to the pseudouridine synthase RsuA family.	0.789
engA	scpB	Rta_18980	Rta_18880	Candidate GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Candidate segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.	0.775

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